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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
total RNA-seq
2
pCHi-C
2
small RNA-seq
Assay category
8
Transcription
Date released
4
July, 2019
4
March, 2020
2
February, 2020
Available data
84
bigWig
81
bam
74
bed narrowPeak
60
bigBed narrowPeak
47
bed broadPeak
35
bed bed3+
34
bigBed broadPeak
26
fastq
15
tagAlign
10
tsv
6
bed bedMethyl
6
bigBed bedMethyl
2
bedpe bed3+
2
hic
1
txt
Organism
10
Homo sapiens
Biosample type
8
tissue
2
primary cell
Organ
478
connective tissue
417
pancreas
401
adipose tissue
174
liver
168
heart
156
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
10
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
10
AMP-T2D consortium
BIOSAMPLE
ASSAY
10 results
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total RNA-seq
pCHi-C
small RNA-seq
tissue
psoas muscle
2
1
skeletal muscle tissue
1
1
gastrocnemius medialis
1
left ventricle myocardium
1
spleen
1
primary cell
skeletal muscle satellite cell
1
1
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