Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
3
ATAC-seq
1
MPRA
1
snATAC-seq
Assay category
Transcription
4
DNA accessibility
Date released
84
February, 2021
3
February, 2023
1
May, 2022
1
October, 2022
Available data
1986
bam
1817
bed narrowPeak
1767
bigWig
1042
bigBed narrowPeak
987
fastq
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
271
bed bed3+
101
zippedFastqFolder
89
txt
64
xls
56
tsv
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
88
Homo sapiens
Biosample type
85
tissue
3
in vitro differentiated cells
1
cell line
Organ
84
bone element
1
musculature of body
Project
89
AMP
Genome assembly (visualization)
4
hg19
Lab
86
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
85
inconsistent ontology term
1
audit script error
assay_slims!
Transcription
files.file_type!
cool
BIOSAMPLE
ASSAY
89 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
ATAC-seq
MPRA
snATAC-seq
tissue
bone element
84
skeletal muscle tissue
1
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
cell line
MIN6
1
Download