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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
2
Hi-C
Assay category
9
DNA accessibility
2
3D chromatin structure
Date released
5
June, 2019
4
October, 2019
2
July, 2019
Available data
180
bam
150
bigWig
129
bed narrowPeak
79
bigBed narrowPeak
68
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
0
txt
Organism
11
Homo sapiens
Biosample type
6
primary cell
5
tissue
Organ
140
kidney
88
bone element
36
limb
35
brain
35
pancreas
34
musculature of body
30
heart
27
connective tissue
21
epithelium
18
ureter
13
liver
13
vasculature
11
blood vessel
6
adipose tissue
4
artery
4
eye
4
skeleton
3
embryo
2
nerve
2
vein
1
spleen
Project
11
AMP
Genome assembly (visualization)
10
hg19
9
GRCh38
Lab
11
AMP-T2D consortium
BIOSAMPLE
ASSAY
11 results
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DNase-seq
Hi-C
primary cell
brain microvascular endothelial cell
1
1
endothelial cell of umbilical vein
2
endothelial cell of hepatic sinusoid
1
kidney capillary endothelial cell
1
tissue
coronary artery
2
tibial artery
2
ascending aorta
1
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