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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
204
DNase-seq
84
RNA microarray
61
total RNA-seq
51
ChIP-seq
13
single cell RNA-seq
7
ATAC-seq
5
Hi-C
2
Capture-C
2
pCHi-C
1
MPRA
1
snATAC-seq
Assay category
204
DNA accessibility
Date released
187
June, 2019
9
November, 2018
7
October, 2019
1
November, 2020
Available data
209
bam
209
bed narrowPeak
209
bigBed narrowPeak
209
bigWig
206
bed broadPeak
206
bigBed broadPeak
204
bed bed3+
12
fastq
0
txt
Organism
204
Homo sapiens
Biosample type
176
tissue
27
primary cell
1
cell line
Organ
78
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
ureter
16
epithelium
11
vasculature
9
blood vessel
8
connective tissue
7
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
204
AMP
Genome assembly (visualization)
204
GRCh38
181
hg19
Lab
204
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
204 results
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Clear Filters
DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 39 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 17 more…
cell line
Panc1
1
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