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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
total RNA-seq
8
single cell RNA-seq
1
MPRA
Assay category
67
Transcription
Date released
February, 2021
57
August, 2021
6
May, 2022
4
February, 2023
1
October, 2022
Available data
391
bam
305
fastq
184
tsv
179
bed narrowPeak
157
tagAlign
153
zippedFastqFolder
113
bigWig
79
bigBed narrowPeak
68
txt
64
xls
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
2
bedpe bed3+
2
csv
1
hic
1
vcf
Organism
67
Homo sapiens
Biosample type
67
tissue
1
cell line
Organ
57
kidney
6
pancreas
4
bone element
4
skeleton
Project
68
AMP
Genome assembly (visualization)
hg19
Lab
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
5
AMP-T2D consortium
month_released!
February, 2021
assembly!
hg19
BIOSAMPLE
ASSAY
68 results
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total RNA-seq
single cell RNA-seq
MPRA
tissue
kidney
49
8
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
ischium
1
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cell line
MIN6
1
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