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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
1
DNase-seq
1
small RNA-seq
1
total RNA-seq
Assay category
8
DNA binding
2
Transcription
1
DNA accessibility
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
Date released
9
June, 2019
2
July, 2019
Available data
13
bam
11
bigWig
9
bed narrowPeak
9
bigBed narrowPeak
2
tsv
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
0
txt
Organism
11
Homo sapiens
Biosample type
tissue
11
primary cell
Organ
357
liver
301
epithelium
250
pancreas
89
connective tissue
85
vasculature
80
blood vessel
67
heart
58
artery
55
blood
55
bodily fluid
40
kidney
29
embryo
20
brain
15
vein
11
musculature of body
3
eye
2
adipose tissue
1
pericardium
Project
11
AMP
Genome assembly (visualization)
11
GRCh38
11
hg19
Lab
11
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
biosample_type!
tissue
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
DNase-seq
small RNA-seq
total RNA-seq
primary cell
skeletal muscle satellite cell
7
1
1
skeletal muscle cell
1
1
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