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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
14
ChIP-seq
1
snATAC-seq
Assay category
34
DNA accessibility
14
DNA binding
Target of assay
14
histone
14
histone modification
8
broad histone mark
6
narrow histone mark
Date released
41
June, 2019
6
May, 2019
1
May, 2022
Available data
68
bigWig
60
bed narrowPeak
57
bam
47
bigBed narrowPeak
46
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
15
tagAlign
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
48
Homo sapiens
Biosample type
39
tissue
9
primary cell
Organ
358
liver
166
kidney
127
brain
97
pancreas
94
heart
88
bone element
84
limb
83
vasculature
79
blood vessel
76
epithelium
54
blood
54
bodily fluid
48
musculature of body
28
connective tissue
26
nerve
25
artery
18
ureter
13
spleen
13
vein
10
adipose tissue
6
eye
4
skeleton
Project
48
AMP
Genome assembly (visualization)
48
hg19
46
GRCh38
Lab
48
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
1
audit script error
BIOSAMPLE
ASSAY
48 results
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DNase-seq
ChIP-seq
snATAC-seq
tissue
muscle of leg
13
6
muscle of arm
17
forelimb muscle
1
hindlimb muscle
1
skeletal muscle tissue
1
primary cell
skeletal muscle satellite cell
7
skeletal muscle cell
1
1
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