Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
1
whole genome sequencing assay
Assay category
4
DNA accessibility
1
DNA sequencing
Date released
4
February, 2021
February, 2023
1
August, 2021
Available data
3392
bam
3126
bigWig
1712
bed narrowPeak
1584
tsv
1282
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
269
bed bed3+
154
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
4
bed bedgraph
4
tar
3
cool
2
bed bed3
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
5
Homo sapiens
Biosample type
4
in vitro differentiated cells
1
cell line
Organ
4
connective tissue
1
liver
Project
5
AMP
Genome assembly (visualization)
4
hg19
Lab
4
AMP-T2D consortium
1
Bing Ren, UCSD
month_released!
February, 2023
BIOSAMPLE
ASSAY
5 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
whole genome sequencing assay
in vitro differentiated cells
adipocyte
4
cell line
HepG2
1
Download