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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
15
total RNA-seq
2
ATAC-seq
1
whole genome sequencing assay
Assay category
30
DNA binding
15
Transcription
2
DNA accessibility
1
DNA sequencing
Target of assay
19
histone
19
histone modification
11
narrow histone mark
11
transcription factor
8
broad histone mark
1
RNA binding protein
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
48
August, 2021
47
October, 2018
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
123
tsv
106
bed narrowPeak
64
xls
57
txt
49
bam
47
bigWig
24
tagAlign
5
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
48
Homo sapiens
Biosample type
23
cell line
22
in vitro differentiated cells
3
primary cell
Organ
18
liver
8
embryo
3
epithelium
2
connective tissue
Project
48
AMP
Genome assembly (visualization)
46
hg19
31
GRCh38
Lab
31
AMP-T2D consortium
15
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
48 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
whole genome sequencing assay
cell line
HepG2
14
1
H1-hESC
8
in vitro differentiated cells
neural progenitor cell
13
7
adipocyte
1
osteoblast
1
primary cell
hepatocyte
3
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