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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
total RNA-seq
2
pCHi-C
Assay category
10
Transcription
Date released
9
August, 2021
1
February, 2020
1
March, 2020
1
May, 2020
Available data
150
bam
122
fastq
94
bigWig
74
bed narrowPeak
55
tagAlign
32
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
12
tsv
3
tar
2
bed bed3+
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hic
1
csv
1
hdf5
1
vcf
0
xls
Organism
12
Homo sapiens
Biosample type
10
cell line
2
tissue
Organ
98
heart
14
brain
12
kidney
12
liver
11
pancreas
10
blood vessel
10
epithelium
10
vasculature
5
eye
4
artery
4
connective tissue
3
adipose tissue
3
limb
3
musculature of body
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
spleen
1
stomach
1
thymus
1
urinary bladder
Project
12
AMP
Genome assembly (visualization)
GRCh38
162
hg19
Lab
9
Bing Ren, UCSD
3
AMP-T2D consortium
organ_slims!
spleen
assembly!
GRCh38
BIOSAMPLE
ASSAY
12 results
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total RNA-seq
pCHi-C
cell line
HepG2
9
1
tissue
liver
1
right lobe of liver
1
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