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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
453
total RNA-seq
3
small RNA-seq
2
single cell RNA-seq
1
pCHi-C
Assay category
458
Transcription
Date released
438
February, 2021
14
July, 2019
4
February, 2020
2
August, 2021
1
March, 2020
Available data
544
bam
510
bigWig
459
tsv
87
bed narrowPeak
44
fastq
35
bigBed narrowPeak
14
tagAlign
10
bed bed3+
7
bed broadPeak
6
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bedpe bed3+
0
xls
Organism
459
Homo sapiens
Biosample type
403
tissue
52
cell line
4
primary cell
Organ
478
connective tissue
417
pancreas
401
adipose tissue
174
liver
168
heart
156
epithelium
88
kidney
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
459
AMP
Genome assembly (visualization)
452
GRCh38
452
hg19
Lab
459
AMP-T2D consortium
BIOSAMPLE
ASSAY
459 results
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total RNA-seq
small RNA-seq
single cell RNA-seq
pCHi-C
tissue
adipose tissue
381
1
subcutaneous adipose tissue
7
1
omental fat pad
5
1
visceral abdominal adipose tissue
3
pulmonary artery
2
+ See 2 more…
cell line
smooth muscle cell of the coronary artery
52
primary cell
mesenchymal stem cell of adipose
1
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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