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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
single cell RNA-seq
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
51
Transcription
Date released
93
May, 2022
18
September, 2020
Available data
3374
bam
3112
bigWig
1777
bed narrowPeak
1594
tsv
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
161
txt
112
zippedFastqFolder
64
xls
23
bedpe bed3+
23
hic
19
bed bedMethyl
19
bigBed bedMethyl
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
111
Homo sapiens
Biosample type
111
primary cell
Organ
39
epithelium
39
pancreas
Project
111
HPAP
Lab
111
Klaus Kaestner, Upenn
assay_title!
WGBS
files.file_type!
fastq
BIOSAMPLE
ASSAY
111 results
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single cell RNA-seq
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
51
21
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
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