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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
21
snATAC-seq
3
Hi-C
Assay category
60
DNA accessibility
Transcription
41
DNA methylation
3
3D chromatin structure
Date released
101
May, 2022
3
October, 2022
Available data
1986
bam
1777
bed narrowPeak
1727
bigWig
1042
bigBed narrowPeak
987
fastq
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
271
bed bed3+
101
zippedFastqFolder
89
txt
64
xls
56
tsv
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
104
Homo sapiens
Biosample type
104
primary cell
Organ
83
epithelium
83
pancreas
Project
104
HPAP
Genome assembly (visualization)
3
hg19
Lab
104
Klaus Kaestner, Upenn
Audit category:
3
audit script error
assay_slims!
Transcription
BIOSAMPLE
ASSAY
104 results
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Clear Filters
WGBS
ATAC-seq
snATAC-seq
Hi-C
primary cell
pancreatic alpha cell
25
22
1
pancreatic beta cell
16
13
1
Langerhans cell
21
pancreatic acinar cell
4
1
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