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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
single cell RNA-seq
21
snATAC-seq
1
ChIP-seq
Assay category
52
Transcription
21
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
54
May, 2022
19
September, 2020
1
October, 2019
Available data
2703
bam
2506
bigWig
1563
bed narrowPeak
1183
tsv
951
bigBed narrowPeak
887
fastq
379
tagAlign
301
bed broadPeak
278
bigBed broadPeak
244
bed bed3+
155
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
16
bedpe bed3+
16
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
4
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
74
Homo sapiens
Biosample type
73
primary cell
1
tissue
Organ
80
epithelium
pancreas
1
brain
Project
73
HPAP
1
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
73
Klaus Kaestner, Upenn
1
AMP-T2D consortium
organ_slims!
pancreas
BIOSAMPLE
ASSAY
74 results
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single cell RNA-seq
snATAC-seq
ChIP-seq
primary cell
Langerhans cell
52
21
tissue
medial globus pallidus
1
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