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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
570
total RNA-seq
6
WGBS
5
single cell RNA-seq
3
snDrop-seq
Assay category
575
Transcription
6
DNA methylation
Date released
559
February, 2021
189
May, 2020
173
May, 2021
164
July, 2018
134
May, 2022
123
August, 2021
89
August, 2017
65
July, 2019
49
April, 2018
45
March, 2020
26
September, 2018
25
February, 2020
20
November, 2019
19
September, 2020
16
February, 2023
16
October, 2019
15
February, 2018
9
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
584
tsv
572
bam
551
bigWig
89
txt
45
fastq
23
bed narrowPeak
8
tagAlign
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
0
zippedFastqFolder
Organism
584
Homo sapiens
Biosample type
477
tissue
78
cell line
22
in vitro differentiated cells
7
primary cell
Organ
451
connective tissue
388
adipose tissue
58
bone element
55
blood vessel
55
heart
55
vasculature
54
artery
33
pancreas
32
epithelium
12
brain
8
kidney
3
limb
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
Project
578
AMP
6
HPAP
Genome assembly (visualization)
545
GRCh38
545
hg19
Lab
578
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
45
inconsistent ontology term
5
audit script error
BIOSAMPLE
ASSAY
584 results
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Clear Filters
total RNA-seq
WGBS
single cell RNA-seq
snDrop-seq
tissue
adipose tissue
381
bone tissue
58
kidney
5
subcutaneous adipose tissue
3
visceral abdominal adipose tissue
3
+ See 27 more…
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
26
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
primary cell
pancreatic alpha cell
6
osteoblast
1
See all biosamples
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