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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
7
DNase-seq
Assay category
46
DNA accessibility
41
DNA methylation
Date released
80
May, 2022
4
June, 2019
2
November, 2018
1
October, 2019
Available data
689
bam
623
bigWig
471
fastq
417
tsv
214
bed narrowPeak
91
bigBed narrowPeak
80
zippedFastqFolder
29
bed bed3+
21
bed broadPeak
19
tagAlign
7
bedpe bed3+
7
bigBed broadPeak
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
1
hdf5
Organism
87
Homo sapiens
Biosample type
80
primary cell
6
tissue
1
cell line
Organ
102
epithelium
87
pancreas
78
kidney
63
liver
38
brain
36
limb
33
musculature of body
30
heart
18
ureter
17
vasculature
13
blood vessel
9
connective tissue
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
80
HPAP
7
AMP
Genome assembly (visualization)
7
GRCh38
5
hg19
Lab
80
Klaus Kaestner, Upenn
7
AMP-T2D consortium
BIOSAMPLE
ASSAY
87 results
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WGBS
ATAC-seq
DNase-seq
primary cell
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
tissue
body of pancreas
4
pancreas
2
cell line
Panc1
1
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