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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
6
single cell RNA-seq
3
total RNA-seq
1
Hi-C
1
WGBS
1
pCHi-C
Assay category
16
DNA binding
9
Transcription
1
3D chromatin structure
1
DNA methylation
Target of assay
16
control
Date released
11
May, 2019
6
August, 2021
5
October, 2019
3
February, 2020
2
March, 2020
1
July, 2019
Available data
17
bam
10
tsv
1
bedpe bed3+
1
hic
Organism
28
Homo sapiens
Biosample type
28
tissue
15
primary cell
2
cell line
Organ
123
liver
122
heart
119
pancreas
92
bone element
67
connective tissue
67
kidney
66
adipose tissue
62
brain
53
eye
40
musculature of body
28
blood vessel
28
vasculature
26
limb
20
lung
15
epithelium
12
nerve
11
artery
9
spleen
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
28
AMP
Genome assembly (visualization)
GRCh38
70
hg19
Lab
28
AMP-T2D consortium
lab.title!
Katalin Susztak, Upenn
assembly!
GRCh38
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
single cell RNA-seq
total RNA-seq
Hi-C
WGBS
pCHi-C
tissue
aorta
2
4
1
1
1
tibial artery
5
1
ascending aorta
3
1
thoracic aorta
4
coronary artery
2
1
pulmonary artery
2
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