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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
ATAC-seq
3
DNase-seq
Assay category
25
DNA binding
15
DNA accessibility
11
Transcription
2
DNA methylation
Date released
6
February, 2023
4
May, 2020
3
June, 2019
2
October, 2019
Available data
9
bam
7
bigWig
6
tsv
5
bed narrowPeak
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
bigBed narrowPeak
Organism
15
Homo sapiens
Biosample type
19
cell line
15
primary cell
10
in vitro differentiated cells
2
tissue
Organ
2
epithelium
1
connective tissue
1
heart
1
kidney
1
liver
1
vasculature
Project
15
AMP
Genome assembly (visualization)
9
hg19
5
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
27
audit script error
15
inconsistent ontology term
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
BIOSAMPLE
ASSAY
15 results
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ATAC-seq
DNase-seq
primary cell
gabaergic neuron
3
microglial cell/astrocyte
3
central memory CD8-positive, alpha-beta T cell
2
naive B cel
2
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
cardiac fibroblast
1
epithelial cell of proximal tubule
1
smooth muscle cell of the brain vasculature
1
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