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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
total RNA-seq
84
ChIP-seq
1
Hi-C
Assay category
96
Transcription
DNA accessibility
84
DNA binding
1
3D chromatin structure
Target of assay
84
histone
84
histone modification
44
broad histone mark
40
narrow histone mark
Date released
135
May, 2021
45
May, 2020
1
March, 2023
Available data
180
bam
180
bigWig
96
tsv
84
bed narrowPeak
84
tagAlign
1
hic
Organism
181
Homo sapiens
Biosample type
181
primary cell
Project
180
T1D
1
ITG
Genome assembly (visualization)
237
hg19
181
GRCh38
Lab
AMP-T2D consortium
180
Kyle Gaulton, UCSD
1
ITG
Audit category:
4
inconsistent ontology term
lab.title!
AMP-T2D consortium
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
181 results
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total RNA-seq
ChIP-seq
Hi-C
primary cell
monocyte
53
84
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
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