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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
snATAC-seq
49
ATAC-seq
47
WGBS
4
Hi-C
Assay category
Transcription
105
DNA accessibility
47
DNA methylation
4
3D chromatin structure
Date released
May, 2021
101
May, 2022
33
February, 2021
8
January, 2021
7
August, 2020
3
October, 2022
3
September, 2020
1
March, 2023
Available data
101
zippedFastqFolder
43
fastq
10
bigWig
6
tsv
4
hic
3
bedpe bed3+
3
cool
Organism
156
Homo sapiens
Biosample type
202
tissue
156
primary cell
36
cell line
7
in vitro differentiated cells
Organ
99
epithelium
99
pancreas
8
blood
8
bodily fluid
Project
147
HPAP
8
T1D
1
ITG
Genome assembly (visualization)
11
GRCh38
3
hg19
Lab
AMP-T2D consortium
147
Klaus Kaestner, Upenn
8
Kyle Gaulton, UCSD
1
ITG
Audit category:
30
audit script error
lab.title!
AMP-T2D consortium
assay_slims!
Transcription
month_released!
May, 2021
BIOSAMPLE
ASSAY
156 results
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snATAC-seq
ATAC-seq
WGBS
Hi-C
primary cell
pancreatic alpha cell
29
31
1
Langerhans cell
48
pancreatic beta cell
16
16
1
peripheral blood mononuclear cell
8
pancreatic acinar cell
4
1
chondrocytes
1
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