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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
152
single cell RNA-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
270
DNA accessibility
172
DNA binding
156
Transcription
47
DNA methylation
8
3D chromatin structure
1
DNA sequencing
Date released
47
September, 2023
40
September, 2020
33
May, 2022
12
February, 2021
9
April, 2020
8
August, 2021
4
March, 2023
3
May, 2023
Available data
52
zippedFastqFolder
34
fastq
8
txt
Organism
152
Homo sapiens
Biosample type
85
primary cell
67
tissue
2
cell line
2
stem cell
Organ
58
kidney
9
lung
Project
85
HPAP
47
KPMP
11
AMP
9
LungMap
4
community
Lab
AMP-T2D consortium
85
Klaus Kaestner, Upenn
47
KPMP
11
Katalin Susztak, Upenn
9
Xin Sun, UCSD
4
Anna Gloyn, Oxford
lab.title!
AMP-T2D consortium
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
156 results
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single cell RNA-seq
CRISPR RNA-seq
CRISPRi RNA-seq
shRNA RNA-seq
siRNA RNA-seq
primary cell
Langerhans cell
85
tissue
kidney
58
lung
9
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
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