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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
286
total RNA-seq
212
ChIP-seq
188
ATAC-seq
152
single cell RNA-seq
82
snATAC-seq
47
WGBS
17
pCHi-C
10
MeRIP-seq
8
Hi-C
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
Transcription
Target of assay
5
control
5
nucleotide modification
Date released
10
November, 2020
1
March, 2023
Organism
10
Homo sapiens
Biosample type
6
cell line
4
tissue
1
stem cell
Organ
10
pancreas
6
epithelium
Project
10
AMP
1
community
Lab
10
Rohit N. Kulkarni, M.D., Ph.D.
1
Anna Gloyn, Oxford
Audit category:
6
inconsistent ontology term
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
11 results
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MeRIP-seq
CRISPR RNA-seq
cell line
EndoC_BH1
6
tissue
islet of Langerhans
4
stem cell
SB Ad3.1
1