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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ATAC-seq
4
Hi-C
Assay category
21
DNA accessibility
4
3D chromatin structure
Date released
18
May, 2022
3
March, 2019
3
October, 2022
1
October, 2017
Available data
19
fastq
18
bam
18
bed narrowPeak
4
hic
3
bedpe bed3+
3
cool
1
bed broadPeak
1
bedpe
1
bigWig
Organism
25
Homo sapiens
Biosample type
22
tissue
3
primary cell
Organ
35
liver
25
pancreas
4
connective tissue
3
epithelium
1
kidney
Project
22
AMP
3
HPAP
Genome assembly (visualization)
25
hg19
13
GRCh38
Lab
AMP-T2D consortium
18
Kyle Gaulton, UCSD
3
Klaus Kaestner, Upenn
2
Bing Ren, UCSD
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
3
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lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
25 results
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ATAC-seq
Hi-C
tissue
islet of Langerhans
21
1
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
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