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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
ATAC-seq
84
ChIP-seq
Assay category
84
DNA accessibility
84
DNA binding
Target of assay
68
histone
68
histone modification
41
broad histone mark
27
narrow histone mark
16
transcription factor
6
RNA binding protein
Date released
78
August, 2021
40
May, 2024
30
May, 2021
20
May, 2022
Available data
300
bigWig
270
bed narrowPeak
bam
195
fastq
153
zippedFastqFolder
112
tsv
84
tagAlign
64
xls
63
txt
7
hic
5
bedpe bed3+
3
cool
2
bed bed3+
2
bed broadPeak
1
bedpe
1
vcf
Organism
168
Homo sapiens
Biosample type
124
tissue
30
primary cell
14
cell line
in vitro differentiated cells
Organ
64
kidney
40
heart
34
liver
Project
168
AMP
Genome assembly (visualization)
104
GRCh38
64
hg19
Lab
AMP-T2D consortium
64
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
30
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
14
Bing Ren, UCSD
lab.title!
AMP-T2D consortium
biosample_type!
in vitro differentiated cells
files.file_type!
bam
BIOSAMPLE
ASSAY
168 results
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ATAC-seq
ChIP-seq
tissue
kidney
64
left cardiac atrium
40
liver
20
primary cell
CD8-positive, alpha-beta T cell
30
cell line
HepG2
14
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