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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
10
ATAC-seq
5
total RNA-seq
Assay category
27
DNA binding
10
DNA accessibility
5
Transcription
Target of assay
20
histone
20
histone modification
12
transcription factor
broad histone mark
10
narrow histone mark
5
RNA binding protein
5
control
Date released
37
May, 2021
3
February, 2023
2
August, 2021
Available data
10
bigWig
4
bed narrowPeak
3
bed bedgraph
3
txt
bed bed3+
Organism
42
Homo sapiens
Biosample type
498
primary cell
332
tissue
46
cell line
42
in vitro differentiated cells
2
stem cell
Organ
2
connective tissue
Project
42
AMP
Genome assembly (visualization)
10
hg19
Lab
AMP-T2D consortium
37
Kyle Gaulton, UCSD
5
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
lab.title!
AMP-T2D consortium
files.file_type!
bed bed3+
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
42 results
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ChIP-seq
ATAC-seq
total RNA-seq
in vitro differentiated cells
embryonic stem cell
27
6
5
Progenitor cell of Hypothalamus (neural progenitor cell)
1
adipocyte
1
neuron cell of Hypothalamus (neuron)
1
osteoblast
1
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