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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
total RNA-seq
19
ATAC-seq
Assay category
102
Transcription
19
DNA accessibility
Date released
51
May, 2021
45
May, 2020
24
May, 2022
1
March, 2019
Available data
270
bigWig
234
bed narrowPeak
205
bam
195
fastq
153
zippedFastqFolder
112
tsv
tagAlign
66
txt
64
xls
7
hic
5
bedpe bed3+
4
bed bed3+
3
bed bedgraph
3
cool
2
bed broadPeak
1
bedpe
1
vcf
Organism
121
Homo sapiens
Biosample type
96
primary cell
25
tissue
Organ
25
pancreas
Project
96
T1D
25
AMP
Genome assembly (visualization)
114
hg19
96
GRCh38
Lab
AMP-T2D consortium
120
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
Audit category:
4
inconsistent ontology term
lab.title!
AMP-T2D consortium
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
121 results
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total RNA-seq
ATAC-seq
primary cell
monocyte
53
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
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tissue
islet of Langerhans
6
19
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