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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
total RNA-seq
47
WGBS
39
ATAC-seq
3
Hi-C
Assay category
53
Transcription
47
DNA methylation
39
DNA accessibility
3
3D chromatin structure
Date released
80
May, 2022
37
February, 2023
16
September, 2020
6
February, 2021
3
October, 2022
Available data
80
zippedFastqFolder
59
fastq
6
tsv
3
bedpe bed3+
3
cool
3
hic
Organism
142
Homo sapiens
Biosample type
142
primary cell
Organ
198
pancreas
142
epithelium
116
kidney
71
liver
19
lung
8
blood
8
bodily fluid
5
connective tissue
1
bone element
1
bone marrow
1
thymus
Project
142
HPAP
Genome assembly (visualization)
GRCh38
3
hg19
Lab
142
Klaus Kaestner, Upenn
AMP-T2D consortium
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
audit script error
lab.title!
AMP-T2D consortium
Rohit N. Kulkarni, M.D., Ph.D.
assembly!
GRCh38
BIOSAMPLE
ASSAY
142 results
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total RNA-seq
WGBS
ATAC-seq
Hi-C
primary cell
pancreatic alpha cell
42
31
22
1
pancreatic beta cell
11
16
13
1
pancreatic acinar cell
4
1
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