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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
40
ATAC-seq
Assay category
114
DNA binding
40
DNA accessibility
Target of assay
114
histone
114
histone modification
64
broad histone mark
50
narrow histone mark
Date released
114
May, 2021
August, 2021
38
May, 2022
2
February, 2023
Available data
254
bigWig
205
bam
195
fastq
154
bed narrowPeak
153
zippedFastqFolder
102
tsv
84
tagAlign
9
txt
5
hic
3
bed bedgraph
3
bedpe bed3+
3
cool
2
bed bed3+
2
bed broadPeak
1
bedpe
Organism
154
Homo sapiens
Biosample type
114
primary cell
38
tissue
2
in vitro differentiated cells
Organ
20
liver
18
pancreas
Project
84
T1D
70
AMP
Genome assembly (visualization)
154
hg19
84
GRCh38
Lab
AMP-T2D consortium
132
Kyle Gaulton, UCSD
20
Karen Mohlke, UNC
2
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
lab.title!
AMP-T2D consortium
month_released!
August, 2021
BIOSAMPLE
ASSAY
154 results
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ChIP-seq
ATAC-seq
primary cell
monocyte
84
CD8-positive, alpha-beta T cell
30
tissue
liver
20
islet of Langerhans
18
in vitro differentiated cells
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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