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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
total RNA-seq
30
ATAC-seq
22
single cell RNA-seq
Assay category
120
Transcription
30
DNA accessibility
Date released
76
February, 2023
February, 2021
41
September, 2020
24
May, 2022
7
August, 2020
1
March, 2019
1
October, 2017
Available data
270
bigWig
234
bed narrowPeak
205
bam
153
zippedFastqFolder
150
fastq
106
tsv
84
tagAlign
66
txt
64
xls
7
hic
5
bedpe bed3+
4
bed bed3+
3
bed bedgraph
3
cool
2
bed broadPeak
1
bedpe
1
vcf
Organism
150
Homo sapiens
Biosample type
124
primary cell
26
tissue
Organ
89
pancreas
63
epithelium
Project
124
HPAP
26
AMP
Genome assembly (visualization)
19
hg19
11
GRCh38
Lab
AMP-T2D consortium
124
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
lab.title!
AMP-T2D consortium
month_released!
February, 2021
BIOSAMPLE
ASSAY
150 results
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total RNA-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic alpha cell
42
7
exocrine cell
39
Langerhans cell
22
pancreatic beta cell
11
3
tissue
islet of Langerhans
6
20
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