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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
total RNA-seq
34
single cell RNA-seq
29
ATAC-seq
27
snATAC-seq
6
WGBS
Assay category
132
Transcription
56
DNA accessibility
6
DNA methylation
Date released
76
February, 2023
45
February, 2021
41
September, 2020
24
May, 2022
7
August, 2020
1
March, 2019
October, 2017
Available data
269
bigWig
234
bed narrowPeak
205
bam
194
fastq
153
zippedFastqFolder
112
tsv
84
tagAlign
66
txt
64
xls
7
hic
5
bedpe bed3+
4
bed bed3+
3
bed bedgraph
3
cool
1
bed broadPeak
1
bedpe
1
vcf
Organism
194
Homo sapiens
Biosample type
169
primary cell
25
tissue
Organ
94
pancreas
69
epithelium
Project
169
HPAP
25
AMP
Genome assembly (visualization)
18
hg19
10
GRCh38
Lab
AMP-T2D consortium
169
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
1
Mark McCarthy, Oxford
Audit category:
27
audit script error
lab.title!
AMP-T2D consortium
month_released!
October, 2017
BIOSAMPLE
ASSAY
194 results
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total RNA-seq
single cell RNA-seq
ATAC-seq
snATAC-seq
WGBS
primary cell
Langerhans cell
34
27
pancreatic alpha cell
42
7
6
exocrine cell
39
pancreatic beta cell
11
3
tissue
islet of Langerhans
6
19
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