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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ATAC-seq
42
single cell RNA-seq
41
WGBS
31
snATAC-seq
26
total RNA-seq
Assay category
108
DNA accessibility
68
Transcription
41
DNA methylation
Date released
235
May, 2021
198
May, 2022
168
August, 2021
102
February, 2023
59
September, 2020
47
September, 2023
45
February, 2021
45
May, 2020
19
April, 2020
16
January, 2021
14
May, 2023
10
November, 2020
7
August, 2020
5
March, 2019
5
March, 2023
3
October, 2022
1
October, 2017
Available data
134
zippedFastqFolder
38
bed narrowPeak
24
bam
24
fastq
20
bigWig
6
txt
Organism
216
Homo sapiens
Biosample type
134
primary cell
83
tissue
Organ
104
pancreas
80
epithelium
40
liver
19
lung
Project
134
HPAP
64
AMP
19
LungMap
Genome assembly (visualization)
38
hg19
Lab
134
Klaus Kaestner, Upenn
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
19
Xin Sun, UCSD
AMP-T2D consortium
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
217 results
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ATAC-seq
single cell RNA-seq
WGBS
snATAC-seq
total RNA-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
pancreatic acinar cell
4
tissue
liver
20
20
islet of Langerhans
18
6
lung
9
10
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