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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
ChIP-seq
Assay category
102
DNA binding
Target of assay
60
control
40
transcription factor
6
RNA binding protein
2
chromatin remodeller
2
histone
2
histone modification
2
narrow histone mark
Date released
206
August, 2021
200
May, 2022
170
February, 2023
144
February, 2021
122
May, 2021
103
May, 2020
102
November, 2017
98
October, 2019
94
August, 2017
56
September, 2020
48
March, 2020
47
September, 2023
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
10
November, 2020
9
November, 2018
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
October, 2017
1
September, 2018
Available data
112
bam
101
fastq
55
bigWig
33
bed narrowPeak
32
bigBed narrowPeak
tagAlign
15
bed broadPeak
14
bigBed broadPeak
3
tar
Organism
102
Homo sapiens
Biosample type
95
cell line
4
tissue
3
primary cell
Organ
95
liver
7
brain
2
epithelium
2
vasculature
1
blood vessel
Project
102
AMP
Genome assembly (visualization)
263
hg19
GRCh38
Lab
102
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
2
inconsistent control read length
2
inconsistent control run_type
lab.title!
Anna Gloyn, Oxford
files.file_type!
tagAlign
assembly!
GRCh38
BIOSAMPLE
ASSAY
102 results
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Clear Filters
ChIP-seq
cell line
HepG2
95
tissue
layer of hippocampus
2
cerebellum (Hemisphere)
1
middle frontal area 46
1
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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