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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
total RNA-seq
5
ChIP-seq
4
pCHi-C
1
RRBS
Assay category
DNA accessibility
19
Transcription
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
20
October, 2019
4
February, 2023
3
June, 2019
1
February, 2020
1
July, 2019
Available data
5
tsv
3
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Organism
29
Homo sapiens
Biosample type
25
tissue
4
primary cell
Organ
760
liver
741
pancreas
369
epithelium
258
heart
249
brain
200
connective tissue
183
kidney
120
vasculature
116
blood vessel
97
adipose tissue
78
limb
61
musculature of body
60
blood
60
bodily fluid
40
nerve
37
embryo
34
artery
29
eye
23
spleen
19
vein
10
lung
5
bone element
5
gonad
5
ovary
4
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
29
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
29
AMP-T2D consortium
lab.title!
Anna Gloyn, Oxford
month_released!
February, 2021
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
29 results
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Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
RRBS
tissue
islet of Langerhans
14
2
4
retina
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
3
1
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