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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
15
total RNA-seq
12
ATAC-seq
2
Capture-C
2
Hi-C
Assay category
26
DNA binding
15
Transcription
12
DNA accessibility
2
3D chromatin structure
Target of assay
15
histone
15
histone modification
11
transcription factor
9
narrow histone mark
6
broad histone mark
1
RNA binding protein
Date released
571
February, 2021
272
November, 2017
229
August, 2017
191
October, 2019
170
May, 2020
147
June, 2019
132
May, 2021
116
July, 2018
93
May, 2019
77
December, 2017
71
November, 2018
65
April, 2019
60
July, 2019
59
November, 2019
57
August, 2021
45
February, 2023
45
October, 2018
39
May, 2022
31
February, 2018
31
March, 2020
30
December, 2018
26
January, 2019
13
October, 2017
6
April, 2018
3
January, 2018
3
March, 2019
2
September, 2017
1
May, 2023
Available data
43
bigWig
38
bed narrowPeak
37
bam
15
tsv
12
tagAlign
2
bed bed3+
2
hic
1
bedpe bed3+
Organism
57
Homo sapiens
Biosample type
33
in vitro differentiated cells
23
cell line
primary cell
1
tissue
Organ
15
liver
8
embryo
4
connective tissue
1
kidney
Project
57
AMP
Genome assembly (visualization)
102
GRCh38
57
hg19
Lab
37
AMP-T2D consortium
15
Bing Ren, UCSD
4
Struan F.A. Grant, CHOP
1
Katalin Susztak, Upenn
lab.title!
Anna Gloyn, Oxford
biosample_type!
primary cell
BIOSAMPLE
ASSAY
57 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
Capture-C
Hi-C
in vitro differentiated cells
neural progenitor cell
12
7
10
adipocyte
1
1
osteoblast
1
1
cell line
HepG2
14
1
H1-hESC
8
tissue
kidney
1
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