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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
316
ChIP-seq
Assay category
316
DNA binding
Target of assay
604
histone modification
603
histone
316
narrow histone mark
287
broad histone mark
176
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
121
October, 2019
50
August, 2017
33
May, 2019
28
November, 2017
27
May, 2020
23
April, 2019
15
May, 2024
11
October, 2018
2
December, 2017
2
January, 2019
2
March, 2020
2
October, 2017
Available data
260
bigWig
258
bed narrowPeak
235
bam
110
tagAlign
100
bigBed narrowPeak
28
fastq
15
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
314
Homo sapiens
Biosample type
316
tissue
115
primary cell
55
in vitro differentiated cells
19
cell line
1
stem cell
Organ
114
brain
44
liver
38
heart
32
pancreas
18
blood vessel
18
vasculature
15
limb
13
connective tissue
12
adipose tissue
10
kidney
9
musculature of body
nerve
6
artery
4
gonad
4
ovary
2
eye
2
spleen
1
lymph node
1
pituitary gland
Project
314
AMP
2
T1D
Genome assembly (visualization)
243
GRCh38
231
hg19
Lab
301
AMP-T2D consortium
15
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
lab.title!
Anna Gloyn, Oxford
organ_slims!
nerve
BIOSAMPLE
ASSAY
316 results
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Clear Filters
ChIP-seq
tissue
liver
42
islet of Langerhans
37
left cardiac atrium
15
subcutaneous abdominal adipose tissue
11
kidney
10
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