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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
314
ChIP-seq
Assay category
314
DNA binding
Target of assay
242
transcription factor
86
histone
histone modification
69
control
66
recombinant protein
50
broad histone mark
36
narrow histone mark
35
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
649
February, 2021
314
May, 2020
314
November, 2017
293
August, 2021
259
May, 2021
212
August, 2017
200
May, 2022
192
June, 2019
170
February, 2023
168
July, 2018
104
October, 2019
96
July, 2019
88
November, 2018
63
December, 2017
59
September, 2020
57
March, 2020
51
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
41
September, 2018
35
December, 2018
23
February, 2018
23
January, 2019
22
February, 2020
20
April, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
14
May, 2019
11
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
May, 2024
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
1
March, 2023
Available data
313
bam
302
fastq
255
bigWig
237
bed narrowPeak
237
bigBed narrowPeak
45
bed broadPeak
45
bigBed broadPeak
11
tagAlign
3
tar
Organism
314
Homo sapiens
Biosample type
300
cell line
12
tissue
2
primary cell
Organ
300
liver
18
brain
4
epithelium
vasculature
2
blood vessel
Project
314
AMP
Genome assembly (visualization)
253
hg19
205
GRCh38
Lab
314
AMP-T2D consortium
Audit category:
9
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
lab.title!
Anna Gloyn, Oxford
organ_slims!
vasculature
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
314 results
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Clear Filters
ChIP-seq
cell line
HepG2
300
tissue
layer of hippocampus
3
caudate nucleus
2
cingulate gyrus
2
middle frontal area 46
2
substantia nigra
2
+ See 1 more…
primary cell
astrocyte of the cerebellum
2
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