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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
Assay category
399
Transcription
73
DNA binding
8
DNA accessibility
6
DNA methylation
Target of assay
32
histone
32
histone modification
24
control
20
broad histone mark
17
transcription factor
12
narrow histone mark
5
RNA binding protein
Date released
50
August, 2017
23
October, 2018
Available data
37
bam
37
fastq
19
bigWig
8
tagAlign
7
bed narrowPeak
6
bigBed narrowPeak
4
bed bed3+
1
bed broadPeak
Organism
73
Homo sapiens
Biosample type
73
tissue
Organ
548
liver
209
brain
148
pancreas
141
connective tissue
129
heart
79
blood vessel
79
vasculature
73
adipose tissue
66
limb
60
blood
60
bodily fluid
37
epithelium
37
kidney
35
nerve
34
artery
29
musculature of body
22
embryo
20
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
73
AMP
Genome assembly (visualization)
19
hg19
18
GRCh38
Lab
73
AMP-T2D consortium
Audit category:
12
missing controlled_by
lab.title!
Anna Gloyn, Oxford
biosample_type!
primary cell
BIOSAMPLE
ASSAY
73 results
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ChIP-seq
tissue
subcutaneous abdominal adipose tissue
36
subcutaneous adipose tissue
12
white adipose tissue
12
omental fat pad
11
adipose tissue
2
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