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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
46
ATAC-seq
6
DNase-seq
Assay category
61
DNA binding
52
DNA accessibility
Target of assay
54
histone
54
histone modification
36
broad histone mark
18
narrow histone mark
7
transcription factor
3
RNA binding protein
Date released
39
May, 2019
35
February, 2023
21
October, 2019
12
February, 2021
4
June, 2019
2
July, 2019
Available data
155
bam
128
bigWig
113
bed narrowPeak
67
tsv
63
bigBed narrowPeak
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
6
tagAlign
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
Organism
113
Homo sapiens
Biosample type
100
tissue
12
cell line
1
primary cell
Organ
441
liver
214
pancreas
203
brain
191
heart
183
kidney
epithelium
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
113
AMP
Genome assembly (visualization)
113
GRCh38
78
hg19
Lab
113
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
lab.title!
Anna Gloyn, Oxford
organ_slims!
epithelium
BIOSAMPLE
ASSAY
113 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
tissue
coronary artery
3
36
2
tibial artery
18
1
2
ascending aorta
13
1
thoracic aorta
12
1
aorta
11
cell line
smooth muscle cell of the coronary artery
4
8
primary cell
smooth muscle cell of the brain vasculature
1
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