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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
1
ATAC-seq
Assay category
6
DNA binding
1
DNA accessibility
Target of assay
5
control
1
broad histone mark
1
histone
1
histone modification
Date released
4
October, 2017
3
November, 2017
Available data
243
bam
222
bigWig
203
bed narrowPeak
bigBed narrowPeak
118
tagAlign
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
26
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
7
Homo sapiens
Biosample type
4
tissue
3
primary cell
Organ
406
pancreas
217
epithelium
109
liver
92
connective tissue
36
adipose tissue
27
embryo
11
spleen
7
brain
6
blood
6
bodily fluid
2
musculature of body
2
vasculature
1
blood vessel
Project
7
AMP
Genome assembly (visualization)
3
hg19
1
GRCh38
Lab
7
AMP-T2D consortium
Audit category:
1
missing controlled_by
lab.title!
Bing Ren, UCSD
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
7 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
brain
3
cerebellum (Hemisphere)
1
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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