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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
100
ATAC-seq
23
ChIP-seq
1
pCHi-C
Assay category
190
Transcription
100
DNA accessibility
23
DNA binding
Target of assay
27
histone
27
histone modification
narrow histone mark
23
control
Date released
683
February, 2021
368
November, 2017
314
May, 2020
276
May, 2021
272
August, 2021
203
June, 2019
169
August, 2017
158
October, 2019
149
February, 2023
102
July, 2019
96
May, 2022
85
May, 2019
81
November, 2018
78
December, 2017
57
April, 2019
50
March, 2020
47
September, 2023
40
September, 2020
35
December, 2018
31
February, 2018
27
January, 2019
25
May, 2024
24
February, 2020
23
October, 2018
19
April, 2020
16
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
256
bam
233
bigWig
189
tsv
23
tagAlign
Organism
314
Homo sapiens
Biosample type
166
tissue
147
primary cell
1
cell line
Organ
167
liver
Project
269
AMP
45
T1D
Genome assembly (visualization)
233
hg19
188
GRCh38
Lab
269
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
lab.title!
Bing Ren, UCSD
organ_slims!
pancreas
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
314 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
liver
143
23
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
+ See 24 more…
cell line
HepG2
1
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