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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
523
total RNA-seq
18
ATAC-seq
5
ChIP-seq
Assay category
523
Transcription
18
DNA accessibility
5
DNA binding
Target of assay
5
transcription factor
Date released
546
February, 2021
280
November, 2017
210
June, 2019
207
May, 2020
203
October, 2019
200
August, 2017
192
May, 2021
164
July, 2018
96
May, 2019
79
July, 2019
79
November, 2018
75
August, 2021
72
September, 2018
64
April, 2019
52
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
39
December, 2017
35
February, 2023
30
December, 2018
26
January, 2019
14
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
546
bam
529
bigWig
523
tsv
23
bed narrowPeak
5
tagAlign
2
bed bed3
Organism
546
Homo sapiens
Biosample type
452
tissue
92
cell line
in vitro differentiated cells
2
primary cell
Organ
446
connective tissue
386
adipose tissue
66
bone element
64
artery
64
blood vessel
64
heart
64
vasculature
26
epithelium
26
pancreas
8
skeleton
6
limb
1
liver
Project
546
AMP
Genome assembly (visualization)
548
hg19
546
GRCh38
Lab
546
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
1
inconsistent replicate
lab.title!
Karen Mohlke, UNC
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
546 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
tissue
adipose tissue
381
bone tissue
58
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
distal epiphysis
1
+ See 7 more…
cell line
smooth muscle cell of the coronary artery
52
8
4
EndoC_BH1
26
HepG2
1
iPSC derived cell line
1
primary cell
osteoblast
1
1
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