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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
2
ATAC-seq
2
DNase-seq
2
total RNA-seq
Assay category
16
DNA binding
4
DNA accessibility
2
Transcription
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
narrow histone mark
Date released
149
May, 2021
72
September, 2018
48
July, 2018
47
June, 2019
45
May, 2020
43
April, 2018
42
August, 2017
22
October, 2019
18
July, 2019
7
August, 2020
6
November, 2017
6
November, 2020
5
December, 2019
5
September, 2017
4
May, 2019
3
August, 2018
3
August, 2021
3
June, 2018
3
September, 2020
2
February, 2021
2
October, 2018
1
March, 2023
Available data
22
bam
20
bed narrowPeak
20
bigWig
12
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
tsv
Organism
22
Homo sapiens
Biosample type
161
tissue
22
primary cell
20
cell line
4
in vitro differentiated cells
Organ
21
epithelium
12
blood vessel
12
vasculature
12
vein
8
kidney
1
liver
Project
22
AMP
Genome assembly (visualization)
26
hg19
22
GRCh38
Lab
22
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
lab.title!
Karen Mohlke, UNC
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
ATAC-seq
DNase-seq
total RNA-seq
primary cell
endothelial cell of umbilical vein
10
2
epithelial cell of proximal tubule
6
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
kidney glomerular epithelial cell
1
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