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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
WGBS
19
RRBS
1
DNAme array
Assay category
396
Transcription
388
DNA accessibility
252
DNA binding
75
DNA methylation
31
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
14
July, 2019
13
August, 2017
6
February, 2021
1
May, 2021
Available data
41
zippedFastqFolder
28
bed bedMethyl
28
bigBed bedMethyl
21
fastq
bam
11
bigWig
6
tsv
Organism
75
Homo sapiens
Biosample type
57
primary cell
18
tissue
Organ
53
epithelium
49
pancreas
6
liver
5
connective tissue
5
musculature of body
4
adipose tissue
heart
4
kidney
2
brain
1
eye
1
pericardium
1
vasculature
Project
47
HPAP
28
AMP
Genome assembly (visualization)
17
hg19
Lab
47
Klaus Kaestner, Upenn
28
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
lab.title!
Karen Mohlke, UNC
organ_slims!
heart
files.file_type!
bam
BIOSAMPLE
ASSAY
75 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 7 more…
tissue
liver
3
1
skeletal muscle tissue
4
subcutaneous abdominal adipose tissue
3
adipose tissue
1
brain
1
+ See 5 more…
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