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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
Assay category
23
DNA binding
Target of assay
54
histone
histone modification
29
narrow histone mark
25
broad histone mark
23
transcription factor
6
chromatin remodeller
3
RNA binding protein
1
recombinant protein
Date released
11
August, 2017
9
November, 2017
3
November, 2018
Available data
23
bam
23
fastq
22
bigWig
11
bed narrowPeak
11
bigBed narrowPeak
6
bed bed3+
Organism
23
Homo sapiens
Biosample type
12
cell line
6
tissue
5
in vitro differentiated cells
Organ
17
connective tissue
adipose tissue
12
liver
6
pancreas
Project
23
AMP
Genome assembly (visualization)
22
hg19
15
GRCh38
Lab
23
AMP-T2D consortium
Audit category:
23
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
lab.title!
Karen Mohlke, UNC
target.investigated_as!
histone modification
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
cell line
HepG2
12
tissue
islet of Langerhans
6
in vitro differentiated cells
adipocyte
5
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