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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
395
ChIP-seq
Assay category
395
DNA binding
Target of assay
395
transcription factor
344
histone
344
histone modification
221
broad histone mark
123
narrow histone mark
83
RNA binding protein
81
recombinant protein
33
chromatin remodeller
5
other context
5
other post-translational modification
Date released
233
November, 2017
63
November, 2018
33
December, 2017
28
December, 2018
15
October, 2018
14
January, 2019
5
April, 2019
4
May, 2019
Available data
486
bigWig
475
bam
459
bed narrowPeak
449
fastq
395
bigBed narrowPeak
44
bed broadPeak
44
bigBed broadPeak
19
bed bed3+
9
tagAlign
3
tar
Organism
395
Homo sapiens
Biosample type
328
cell line
65
tissue
primary cell
2
in vitro differentiated cells
Organ
314
liver
51
blood
51
bodily fluid
10
pancreas
7
heart
6
spleen
5
adipose tissue
5
connective tissue
3
blood vessel
3
vasculature
2
epithelium
1
artery
Project
395
AMP
Genome assembly (visualization)
391
hg19
363
GRCh38
Lab
395
AMP-T2D consortium
Audit category:
28
inconsistent control
Audit category:
11
missing controlled_by
Audit category:
15
inconsistent control read length
8
inconsistent control run_type
lab.title!
Karen Mohlke, UNC
biosample_type!
primary cell
BIOSAMPLE
ASSAY
395 results
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Clear Filters
ChIP-seq
cell line
HepG2
277
GM12878
51
tissue
liver
33
body of pancreas
9
spleen
6
heart left ventricle
5
omental fat pad
3
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in vitro differentiated cells
hepatocyte
2
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