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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
single cell RNA-seq
11
total RNA-seq
1
small RNA-seq
Assay category
82
DNA accessibility
65
Transcription
52
DNA binding
4
DNA methylation
Date released
47
September, 2023
6
July, 2019
6
October, 2019
5
February, 2021
1
December, 2019
Available data
17
tsv
12
bam
12
bigWig
5
csv
5
txt
Organism
65
Homo sapiens
Biosample type
55
tissue
6
primary cell
4
cell line
Organ
481
connective tissue
479
pancreas
401
adipose tissue
201
epithelium
193
liver
166
heart
67
blood vessel
67
vasculature
65
kidney
62
bone element
58
artery
24
brain
19
eye
14
embryo
9
lung
9
musculature of body
7
limb
5
nerve
4
skeleton
1
pericardium
1
spinal cord
Project
47
KPMP
18
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
Katalin Susztak, Upenn
47
KPMP
18
AMP-T2D consortium
Audit category:
5
audit script error
3
inconsistent ontology term
lab.title!
Katalin Susztak, Upenn
BIOSAMPLE
ASSAY
65 results
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single cell RNA-seq
total RNA-seq
small RNA-seq
tissue
kidney
53
metanephros
1
1
primary cell
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
kidney epithelial cell
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
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cell line
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
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