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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
WGBS
21
RRBS
Assay category
449
Transcription
439
DNA binding
372
DNA accessibility
79
DNA methylation
28
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
19
July, 2019
13
August, 2017
6
February, 2021
May, 2021
Available data
41
zippedFastqFolder
36
bed bedMethyl
36
bigBed bedMethyl
21
fastq
18
bam
bigWig
6
tsv
Organism
79
Homo sapiens
Biosample type
57
primary cell
22
tissue
Organ
53
epithelium
49
pancreas
6
liver
5
connective tissue
5
musculature of body
4
adipose tissue
4
heart
4
kidney
2
brain
2
vasculature
1
blood vessel
1
eye
1
pericardium
Project
47
HPAP
32
AMP
Genome assembly (visualization)
19
hg19
Lab
47
Klaus Kaestner, Upenn
32
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
lab.title!
Katalin Susztak, Upenn
files.file_type!
bigWig
month_released!
May, 2021
BIOSAMPLE
ASSAY
79 results
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WGBS
RRBS
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
+ See 7 more…
tissue
liver
3
1
skeletal muscle tissue
4
heart left ventricle
2
1
subcutaneous abdominal adipose tissue
3
adipose tissue
1
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