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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
1
FAIRE-seq
1
WGBS
Assay category
27
DNA binding
1
DNA accessibility
1
DNA methylation
Target of assay
22
control
5
histone
5
histone modification
4
broad histone mark
1
narrow histone mark
Date released
13
October, 2019
11
May, 2019
2
February, 2021
2
November, 2017
1
July, 2019
Available data
29
bam
10
tsv
7
bigWig
3
hic
2
bed bed3+
2
bed broadPeak
2
bedpe bed3+
2
bigBed broadPeak
2
fastq
2
hdf5
2
tagAlign
1
bed bedMethyl
1
bed narrowPeak
1
bigBed bedMethyl
1
bigBed narrowPeak
1
tar
Organism
29
Homo sapiens
Biosample type
17
tissue
10
primary cell
2
cell line
Organ
150
liver
68
pancreas
33
epithelium
29
vasculature
28
blood vessel
28
brain
28
connective tissue
20
heart
19
adipose tissue
18
limb
14
kidney
11
nerve
9
artery
8
spleen
8
vein
7
embryo
6
blood
6
bodily fluid
4
musculature of body
1
eye
Project
29
AMP
Genome assembly (visualization)
159
hg19
GRCh38
Lab
29
AMP-T2D consortium
lab.title!
Katalin Susztak, Upenn
assembly!
GRCh38
BIOSAMPLE
ASSAY
29 results
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Clear Filters
ChIP-seq
FAIRE-seq
WGBS
tissue
tibial artery
5
thoracic aorta
4
aorta
2
1
ascending aorta
3
coronary artery
2
primary cell
endothelial cell of umbilical vein
7
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
cell line
smooth muscle cell of the coronary artery
2
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