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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
MeRIP-seq
2
ChIP-seq
Assay category
2
DNA binding
Target of assay
1017
histone modification
1016
histone
514
narrow histone mark
501
broad histone mark
450
transcription factor
337
control
93
RNA binding protein
73
recombinant protein
29
chromatin remodeller
5
nucleotide modification
2
other context
2
other post-translational modification
Date released
5
November, 2020
November, 2018
2
November, 2017
Available data
2
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
2
fastq
1
bed broadPeak
1
bigBed broadPeak
Organism
7
Homo sapiens
Biosample type
5
cell line
2
tissue
Organ
5
pancreas
3
epithelium
2
liver
Project
7
AMP
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
5
Rohit N. Kulkarni, M.D., Ph.D.
2
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
lab.title!
Katalin Susztak, Upenn
month_released!
November, 2018
BIOSAMPLE
ASSAY
7 results
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MeRIP-seq
ChIP-seq
cell line
EndoC_BH1
3
HepG2
2
tissue
islet of Langerhans
2
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