Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1831
ChIP-seq
1441
total RNA-seq
482
ATAC-seq
278
single cell RNA-seq
212
DNase-seq
87
RNA microarray
57
pCHi-C
36
snATAC-seq
31
Hi-C
28
WGBS
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Date released
5
August, 2021
5
January, 2018
Available data
5
bigWig
5
fastq
Organism
10
Homo sapiens
Biosample type
5
cell line
4
in vitro differentiated cells
1
stem cell
Organ
2
kidney
2
liver
1
embryo
Project
10
AMP
Genome assembly (visualization)
5
hg18
Lab
5
AMP-T2D consortium
5
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
lab.title!
Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY
10 results
search-icon
table-tab-icon
Clear Filters
GRO-seq
STARR-seq
cell line
HEK293T
2
HepG2
2
Synthesized DNA
1
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
Download